Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama family transporter rard | D1781_02765 | Not Available | Positive | 529596 - 530525 | 32690.0 |
| branched-chain amino acid abc transporter substrate-binding protein | D1781_02770 | Not Available | Positive | 530682 - 531944 | 43167.5 |
| hypothetical protein | D1781_02775 | Not Available | Negative | 532367 - 533209 | 28981.0 |
| abc transporter atp-binding protein | D1781_02780 | Not Available | Negative | 533206 - 533955 | 26974.8 |
| abc transporter atp-binding protein | D1781_02785 | Not Available | Negative | 533948 - 534871 | 33490.1 |
| branched-chain amino acid abc transporter permease | D1781_02790 | Not Available | Negative | 534864 - 535835 | 34662.4 |
| branched-chain amino acid abc transporter permease | D1781_02795 | Not Available | Negative | 535844 - 537277 | 48526.6 |
| imp dehydrogenase | D1781_02800 | Not Available | Positive | 537453 - 538952 | 52968.3 |
| guab3 family imp dehydrogenase-related protein | D1781_02805 | Not Available | Positive | 539025 - 540140 | 39742.5 |
| glycerol-3-phosphate dehydrogenase/oxidase | D1781_02810 | Not Available | Positive | 540309 - 542072 | 64148.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
