Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine racemase | D1781_02715 | Not Available | Positive | 522795 - 523883 | 37404.4 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | D1781_02720 | Not Available | Positive | 523805 - 524341 | 19020.6 |
| hypothetical protein | D1781_02725 | Not Available | Negative | 524317 - 524928 | 19664.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | D1781_02730 | Not Available | Positive | 524972 - 525577 | 20761.1 |
| ribosomal-protein-alanine n-acetyltransferase | D1781_02735 | Not Available | Positive | 525622 - 526038 | 14563.2 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | D1781_02740 | Not Available | Positive | 526035 - 527102 | 36237.6 |
| hypothetical protein | D1781_02745 | Not Available | Positive | 527229 - 527561 | 11400.1 |
| duf4190 domain-containing protein | D1781_02750 | Not Available | Positive | 527566 - 527859 | 10232.8 |
| class i sam-dependent methyltransferase | D1781_02755 | Not Available | Negative | 527896 - 529077 | 41888.8 |
| co-chaperone groes | D1781_02760 | Not Available | Positive | 529217 - 529513 | 10489.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
