Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i 3-dehydroquinate dehydratase | D1781_02665 | Not Available | Negative | 513716 - 514576 | 29514.0 |
| atp-dependent dna ligase | D1781_02670 | Not Available | Negative | 514489 - 515541 | 37818.1 |
| trna pseudouridine(38-40) synthase trua | D1781_02675 | Not Available | Positive | 515601 - 516473 | 30826.8 |
| 50s ribosomal protein l13 | D1781_02680 | Not Available | Positive | 516661 - 517107 | 16098.5 |
| 30s ribosomal protein s9 | D1781_02685 | Not Available | Positive | 517134 - 517616 | 17134.6 |
| phosphoglucosamine mutase | D1781_02690 | Not Available | Positive | 517640 - 518995 | 45988.0 |
| hypothetical protein | D1781_02695 | Not Available | Positive | 518992 - 519459 | 16651.1 |
| type i pantothenate kinase | D1781_02700 | Not Available | Negative | 519485 - 520435 | 35143.9 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | D1781_02705 | Not Available | Positive | 520528 - 522381 | 65649.7 |
| holo-acp synthase | D1781_02710 | Not Available | Positive | 522378 - 522728 | 12397.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
