Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l29 | D1781_02565 | Not Available | Positive | 502465 - 502803 | 12436.7 |
| 30s ribosomal protein s17 | D1781_02570 | Not Available | Positive | 502803 - 503126 | 11887.3 |
| 50s ribosomal protein l14 | D1781_02575 | Not Available | Positive | 503131 - 503499 | 13239.2 |
| 50s ribosomal protein l24 | D1781_02580 | Not Available | Positive | 503503 - 503862 | 12910.7 |
| 50s ribosomal protein l5 | D1781_02585 | Not Available | Positive | 503866 - 504447 | 21426.6 |
| 30s ribosomal protein s8 | D1781_02590 | Not Available | Positive | 504528 - 504926 | 14137.2 |
| 50s ribosomal protein l6 | D1781_02595 | Not Available | Positive | 504933 - 505469 | 18803.7 |
| 50s ribosomal protein l18 | D1781_02600 | Not Available | Positive | 505472 - 505831 | 12549.9 |
| 30s ribosomal protein s5 | D1781_02605 | Not Available | Positive | 505828 - 506553 | 24636.1 |
| 50s ribosomal protein l30 | D1781_02610 | Not Available | Positive | 506550 - 506735 | 6997.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
