Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_02515 | Not Available | Negative | 496290 - 497240 | 35810.6 |
| 30s ribosomal protein s10 | D1781_02520 | Not Available | Positive | 497849 - 498157 | 11437.0 |
| 50s ribosomal protein l3 | D1781_02525 | Not Available | Positive | 498169 - 498822 | 22820.6 |
| 50s ribosomal protein l4 | D1781_02530 | Not Available | Positive | 498825 - 499433 | 21281.6 |
| 50s ribosomal protein l23 | D1781_02535 | Not Available | Positive | 499430 - 499732 | 11121.5 |
| 50s ribosomal protein l2 | D1781_02540 | Not Available | Positive | 499752 - 500591 | 30413.5 |
| 30s ribosomal protein s19 | D1781_02545 | Not Available | Positive | 500604 - 500885 | 10712.2 |
| 50s ribosomal protein l22 | D1781_02550 | Not Available | Positive | 500911 - 501303 | 14296.2 |
| 30s ribosomal protein s3 | D1781_02555 | Not Available | Positive | 501303 - 502046 | 27879.5 |
| 50s ribosomal protein l16 | D1781_02560 | Not Available | Positive | 502046 - 502465 | 15524.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
