Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor g | D1781_02465 | Not Available | Positive | 483024 - 485087 | 75673.1 |
| elongation factor tu | D1781_02470 | Not Available | Positive | 485377 - 486570 | 43737.3 |
| hypothetical protein | D1781_02475 | Not Available | Negative | 486641 - 487261 | 23418.9 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | D1781_02480 | Not Available | Positive | 487339 - 488898 | 54508.6 |
| dna topoisomerase ib | D1781_02485 | Not Available | Positive | 489133 - 490242 | 40934.3 |
| laci family transcriptional regulator | D1781_02490 | Not Available | Positive | 490252 - 491274 | 35986.1 |
| alpha-n-arabinofuranosidase | D1781_02495 | Not Available | Positive | 491413 - 492933 | 55103.6 |
| sugar abc transporter substrate-binding protein | D1781_02500 | Not Available | Positive | 492988 - 494334 | 47999.6 |
| sugar abc transporter permease | D1781_02505 | Not Available | Positive | 494363 - 495298 | 33645.6 |
| carbohydrate abc transporter permease | D1781_02510 | Not Available | Positive | 495300 - 496226 | 33140.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
