Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_02360 | Not Available | Positive | 460102 - 461244 | 40330.9 |
| carbon storage regulator | D1781_02365 | Not Available | Positive | 461337 - 461687 | 11874.3 |
| alpha/beta fold hydrolase | D1781_02370 | Not Available | Negative | 461694 - 462995 | 47941.3 |
| mfs transporter | D1781_02375 | Not Available | Positive | 463135 - 464568 | 46978.7 |
| m20/m25/m40 family metallo-hydrolase | D1781_02380 | Not Available | Positive | 464565 - 465860 | 44451.8 |
| type ii/iv secretion system protein | D1781_02385 | Not Available | Positive | 465939 - 467510 | 56933.4 |
| type iv pilus twitching motility protein pilt | D1781_02390 | Not Available | Positive | 467584 - 468717 | 41018.1 |
| type ii secretion system f family protein | D1781_02395 | Not Available | Positive | 468717 - 469973 | 44362.0 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | D1781_02405 | Not Available | Positive | 470980 - 472317 | 45011.0 |
| hypothetical protein | D1781_02410 | Not Available | Negative | 472883 - 473353 | 15143.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
