Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 401907 - 401993 | Not Available |
| fad-dependent oxidoreductase | D1781_02065 | Not Available | Negative | 402136 - 403242 | 38781.4 |
| marr family transcriptional regulator | D1781_02070 | Not Available | Positive | 403333 - 403770 | 16168.3 |
| helix-turn-helix domain-containing protein | D1781_02075 | Not Available | Negative | 403820 - 403981 | 5840.06 |
| sdr family nad(p)-dependent oxidoreductase | D1781_02080 | Not Available | Negative | 404074 - 404931 | 29049.9 |
| tetr/acrr family transcriptional regulator | D1781_02085 | Not Available | Positive | 405013 - 405723 | 25104.8 |
| hypothetical protein | D1781_02090 | Not Available | Positive | 405779 - 406423 | 21614.3 |
| sgnh/gdsl hydrolase family protein | D1781_02095 | Not Available | Negative | 406424 - 407158 | 25955.3 |
| cys-trna(pro) deacylase | D1781_02100 | Not Available | Negative | 407155 - 407643 | 16844.4 |
| fpg/nei family dna glycosylase | D1781_02105 | Not Available | Negative | 407673 - 408467 | 29605.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
