Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidyltransferase | D1781_17050 | Not Available | Negative | 3414801 - 3415253 | 16799.2 |
| glycosyl transferase family 28 | D1781_17055 | Not Available | Negative | 3415357 - 3416040 | 24729.4 |
| udp-n-acetylglucosamine--lps n-acetylglucosamine transferase | D1781_17060 | Not Available | Negative | 3416037 - 3416486 | 16951.5 |
| hypothetical protein | D1781_17065 | Not Available | Negative | 3416490 - 3418067 | 52992.2 |
| o-antigen ligase domain-containing protein | D1781_17070 | Not Available | Negative | 3418064 - 3419257 | 42055.3 |
| glycosyltransferase | D1781_17075 | Not Available | Negative | 3419341 - 3420261 | 33080.6 |
| cdp-alcohol phosphatidyltransferase family protein | D1781_17080 | Not Available | Negative | 3420258 - 3421031 | 26949.0 |
| hypothetical protein | D1781_17085 | Not Available | Negative | 3421028 - 3424411 | 116027.0 |
| duf4101 domain-containing protein | D1781_17090 | Not Available | Negative | 3424509 - 3425120 | 21276.3 |
| glycoside hydrolase family 16 protein | D1781_17095 | Not Available | Positive | 3426459 - 3427145 | 25118.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
