Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 4 protein | D1781_16950 | Not Available | Positive | 3389104 - 3390336 | 45334.7 |
| hypothetical protein | D1781_16955 | Not Available | Negative | 3390428 - 3391789 | 46813.2 |
| glycosyltransferase | D1781_16960 | Not Available | Negative | 3391843 - 3393393 | 55179.2 |
| glycosyltransferase | D1781_16965 | Not Available | Positive | 3393299 - 3394417 | 40622.7 |
| glycosyltransferase family 1 protein | D1781_16970 | Not Available | Positive | 3394417 - 3395385 | 34770.4 |
| duf4012 domain-containing protein | D1781_16975 | Not Available | Positive | 3395489 - 3397375 | 67573.2 |
| cytidyltransferase | D1781_16980 | Not Available | Negative | 3397382 - 3397834 | 16900.3 |
| glycosyltransferase family 1 protein | D1781_16985 | Not Available | Negative | 3397831 - 3398967 | 40387.3 |
| glycosyltransferase family 1 protein | D1781_16990 | Not Available | Negative | 3399041 - 3400279 | 45522.0 |
| o-antigen ligase family protein | D1781_16995 | Not Available | Negative | 3400478 - 3401761 | 45516.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
