Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| right-handed parallel beta-helix repeat-containing protein | D1781_16900 | Not Available | Negative | 3376518 - 3377708 | 42369.2 |
| hypothetical protein | D1781_16905 | Not Available | Positive | 3377689 - 3378285 | 20971.3 |
| nad-dependent epimerase/dehydratase family protein | D1781_16910 | Not Available | Negative | 3378259 - 3379653 | 50127.7 |
| dtdp-glucose 4,6-dehydratase | D1781_16915 | Not Available | Negative | 3379653 - 3380651 | 37075.0 |
| glucose-1-phosphate thymidylyltransferase | D1781_16920 | Not Available | Negative | 3380648 - 3381523 | 31843.8 |
| acyltransferase | D1781_16925 | Not Available | Positive | 3381605 - 3383797 | 78153.5 |
| vanz family protein | D1781_16930 | Not Available | Positive | 3383925 - 3384443 | 18720.3 |
| sugar transferase | D1781_16935 | Not Available | Positive | 3384483 - 3386018 | 57033.8 |
| o-antigen ligase domain-containing protein | D1781_16940 | Not Available | Positive | 3386262 - 3387809 | 54469.0 |
| glycosyltransferase family 1 protein | D1781_16945 | Not Available | Positive | 3387919 - 3388980 | 38801.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
