Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate--protein phosphotransferase | D1781_16595 | Not Available | Positive | 3302458 - 3304122 | 57086.2 |
| hypothetical protein | D1781_16600 | Not Available | Negative | 3304183 - 3306087 | 65021.8 |
| succinate dehydrogenase iron-sulfur subunit | D1781_16605 | Not Available | Negative | 3306280 - 3307041 | 28677.3 |
| succinate dehydrogenase flavoprotein subunit | D1781_16610 | Not Available | Negative | 3307080 - 3308900 | 66610.1 |
| succinate dehydrogenase | D1781_16615 | Not Available | Negative | 3309032 - 3309472 | 15831.5 |
| succinate dehydrogenase, cytochrome b556 subunit | D1781_16620 | Not Available | Negative | 3309472 - 3309900 | 15753.8 |
| mannose-1-phosphate guanylyltransferase | D1781_16625 | Not Available | Positive | 3310038 - 3311174 | 40353.0 |
| cytidine deaminase | D1781_16630 | Not Available | Positive | 3311237 - 3311653 | 14679.7 |
| bmp family abc transporter substrate-binding protein | D1781_16635 | Not Available | Positive | 3311799 - 3312905 | 37637.0 |
| abc transporter atp-binding protein | D1781_16640 | Not Available | Positive | 3312988 - 3314502 | 54239.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
