Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6,7-dimethyl-8-ribityllumazine synthase | D1781_16545 | Not Available | Negative | 3292059 - 3292535 | 15826.7 |
| gtp cyclohydrolase ii | D1781_16550 | Not Available | Negative | 3292532 - 3293803 | 45017.5 |
| riboflavin synthase | D1781_16555 | Not Available | Negative | 3293803 - 3294438 | 21834.1 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | D1781_16560 | Not Available | Negative | 3294441 - 3295433 | 33758.3 |
| alpha/beta hydrolase | D1781_16565 | Not Available | Negative | 3295704 - 3296738 | 35386.0 |
| hypothetical protein | D1781_16570 | Not Available | Positive | 3296777 - 3297937 | 39211.9 |
| fad-binding oxidoreductase | D1781_16575 | Not Available | Negative | 3297947 - 3299047 | 38194.8 |
| tryptophan--trna ligase | D1781_16580 | Not Available | Negative | 3299127 - 3300134 | 36732.7 |
| exodeoxyribonuclease iii | D1781_16585 | Not Available | Negative | 3300187 - 3301029 | 30855.0 |
| yihy/virulence factor brkb family protein | D1781_16590 | Not Available | Negative | 3301072 - 3302319 | 44219.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
