Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent succinate-semialdehyde dehydrogenase | D1781_16495 | Not Available | Positive | 3279261 - 3280733 | 51653.6 |
| abc transporter atp-binding protein | D1781_16500 | Not Available | Negative | 3281038 - 3282837 | 62498.1 |
| hypothetical protein | D1781_16505 | Not Available | Negative | 3282887 - 3283099 | 7821.33 |
| mfs transporter | D1781_16510 | Not Available | Negative | 3283153 - 3284562 | 49397.1 |
| iclr family transcriptional regulator | D1781_16515 | Not Available | Negative | 3284608 - 3285339 | 25163.2 |
| coa ester lyase | D1781_16520 | Not Available | Negative | 3285527 - 3286396 | 30983.6 |
| aarf/abc1/ubib kinase family protein | D1781_16525 | Not Available | Negative | 3286449 - 3288185 | 61645.2 |
| alpha-hydroxy-acid oxidizing protein | D1781_16530 | Not Available | Negative | 3288291 - 3289529 | 44947.1 |
| na+/h+ antiporter | D1781_16535 | Not Available | Negative | 3289572 - 3291125 | 55254.4 |
| ribokinase | D1781_16540 | Not Available | Positive | 3291209 - 3292033 | 27269.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
