Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_16395 | Not Available | Negative | 3260534 - 3261097 | 20505.9 |
| low temperature requirement protein a | D1781_16400 | Not Available | Positive | 3261206 - 3262528 | 46573.4 |
| Trna-pro | Not Available | Not Available | Positive | 3262542 - 3262618 | Not Available |
| metallophosphoesterase | D1781_16410 | Not Available | Negative | 3262703 - 3263638 | 33054.7 |
| pasta domain-containing protein | D1781_16415 | Not Available | Negative | 3263611 - 3266202 | 90442.8 |
| duf4177 domain-containing protein | D1781_16420 | Not Available | Positive | 3266272 - 3266430 | 5650.85 |
| rida family protein | D1781_16425 | Not Available | Positive | 3266427 - 3266888 | 15450.7 |
| pilus assembly protein cpaf | D1781_16430 | Not Available | Positive | 3267311 - 3268315 | 33858.2 |
| hypothetical protein | D1781_16435 | Not Available | Positive | 3268312 - 3269211 | 29550.1 |
| duf4244 domain-containing protein | D1781_16440 | Not Available | Positive | 3269301 - 3269492 | 6756.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
