Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | D1781_16035 | Not Available | Negative | 3196228 - 3197004 | 26758.3 |
| trkh family potassium uptake protein | D1781_16045 | Not Available | Negative | 3197730 - 3199076 | 46309.5 |
| nudix hydrolase | D1781_16050 | Not Available | Negative | 3199153 - 3199695 | 19326.0 |
| duf2382 domain-containing protein | D1781_16055 | Not Available | Positive | 3199884 - 3200798 | 32969.3 |
| 50s ribosomal protein l10 | D1781_16060 | Not Available | Positive | 3201089 - 3201604 | 18161.7 |
| 50s ribosomal protein l7/l12 | D1781_16065 | Not Available | Positive | 3201652 - 3202038 | 13225.8 |
| hypothetical protein | D1781_16070 | Not Available | Positive | 3202139 - 3202588 | 16104.2 |
| laci family transcriptional regulator | D1781_16075 | Not Available | Negative | 3202605 - 3203615 | 35899.8 |
| hypothetical protein | D1781_16080 | Not Available | Negative | 3203639 - 3203881 | 9124.15 |
| carbohydrate abc transporter permease | D1781_16085 | Not Available | Negative | 3203881 - 3204798 | 32684.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
