Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination/antitermination protein nusg | D1781_15835 | Not Available | Positive | 3158872 - 3159933 | 38667.2 |
| 50s ribosomal protein l11 | D1781_15840 | Not Available | Positive | 3160168 - 3160599 | 15146.3 |
| 50s ribosomal protein l1 | D1781_15845 | Not Available | Positive | 3160612 - 3161304 | 23960.7 |
| nadp-dependent oxidoreductase | D1781_15850 | Not Available | Negative | 3161463 - 3162419 | 32867.3 |
| dna-binding response regulator | D1781_15855 | Not Available | Positive | 3162684 - 3163439 | 28311.0 |
| sensor histidine kinase | D1781_15860 | Not Available | Positive | 3163466 - 3164944 | 52127.0 |
| 1-phosphofructokinase | D1781_15865 | Not Available | Negative | 3165023 - 3166015 | 34951.6 |
| duf1275 domain-containing protein | D1781_15870 | Not Available | Negative | 3166076 - 3166771 | 23545.8 |
| acetamidase | D1781_15875 | Not Available | Positive | 3166886 - 3167968 | 37991.1 |
| duf3225 domain-containing protein | D1781_15880 | Not Available | Positive | 3167961 - 3169499 | 52513.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
