Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-antigen ligase domain-containing protein | D1781_15580 | Not Available | Negative | 3115163 - 3116440 | 46062.2 |
| glycosyltransferase | D1781_15585 | Not Available | Negative | 3116433 - 3117437 | 35898.5 |
| acyltransferase | D1781_15590 | Not Available | Negative | 3117802 - 3119037 | 45175.3 |
| gdp-l-fucose synthase | D1781_15595 | Not Available | Negative | 3119245 - 3120228 | 35392.9 |
| gdp-mannose 4,6-dehydratase | D1781_15600 | Not Available | Negative | 3120225 - 3120501 | 10136.8 |
| hypothetical protein | D1781_15610 | Not Available | Negative | 3120859 - 3121110 | 9111.46 |
| serine/threonine protein kinase | D1781_15615 | Not Available | Negative | 3121152 - 3121970 | 29995.2 |
| nudix domain-containing protein | D1781_15620 | Not Available | Negative | 3122192 - 3122656 | 17173.2 |
| cardiolipin synthase | D1781_15625 | Not Available | Negative | 3122702 - 3124162 | 55526.4 |
| yajq family cyclic di-gmp-binding protein | D1781_15630 | Not Available | Negative | 3124223 - 3124711 | 17969.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
