Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallopeptidase family protein | D1781_15380 | Not Available | Positive | 3067683 - 3068123 | 16658.8 |
| polyprenol monophosphomannose synthase | D1781_15385 | Not Available | Positive | 3068210 - 3069040 | 30437.5 |
| acyltransferase | D1781_15390 | Not Available | Negative | 3069086 - 3070318 | 44932.2 |
| hypothetical protein | D1781_15395 | Not Available | Negative | 3070413 - 3071954 | 48746.3 |
| glycosyltransferase family 2 protein | D1781_15400 | Not Available | Negative | 3071945 - 3075082 | 108477.0 |
| whib family transcriptional regulator | D1781_15405 | Not Available | Negative | 3075117 - 3075437 | 11956.9 |
| udp-glucose 4-epimerase gale | D1781_15410 | Not Available | Negative | 3075923 - 3076882 | 34032.0 |
| hypothetical protein | D1781_15415 | Not Available | Negative | 3076947 - 3077285 | 11724.1 |
| sos response-associated peptidase | D1781_15420 | Not Available | Positive | 3077365 - 3078057 | 25251.1 |
| duf559 domain-containing protein | D1781_15425 | Not Available | Negative | 3078163 - 3079236 | 40476.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
