Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter permease | D1781_15280 | Not Available | Positive | 3047441 - 3048397 | 33659.5 |
| carbohydrate abc transporter permease | D1781_15285 | Not Available | Positive | 3048394 - 3049296 | 33095.3 |
| ribosome-associated translation inhibitor raia | D1781_15290 | Not Available | Negative | 3049355 - 3050050 | 25468.0 |
| comf family protein | D1781_15295 | Not Available | Negative | 3050224 - 3050862 | 22295.5 |
| hypothetical protein | D1781_15300 | Not Available | Negative | 3050922 - 3052595 | 58487.5 |
| sensor histidine kinase | D1781_15305 | Not Available | Negative | 3052592 - 3054262 | 59584.3 |
| dna-binding response regulator | D1781_15310 | Not Available | Negative | 3054267 - 3054947 | 24488.5 |
| hypothetical protein | D1781_15315 | Not Available | Positive | 3055130 - 3056287 | 40248.7 |
| duf4129 domain-containing protein | D1781_15320 | Not Available | Positive | 3056284 - 3056922 | 22540.8 |
| duf4350 domain-containing protein | D1781_15325 | Not Available | Positive | 3056919 - 3058124 | 41071.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
