Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | D1781_15180 | Not Available | Positive | 3029793 - 3030437 | 22359.0 |
| amino acid transporter | D1781_15185 | Not Available | Negative | 3030462 - 3031148 | 23098.9 |
| lysr family transcriptional regulator argp | D1781_15190 | Not Available | Positive | 3031218 - 3032129 | 32668.1 |
| duf3263 domain-containing protein | D1781_15195 | Not Available | Positive | 3032169 - 3032411 | 9695.8 |
| mfs transporter | D1781_15200 | Not Available | Negative | 3032469 - 3033749 | 42628.5 |
| helix-turn-helix domain-containing protein | D1781_15205 | Not Available | Negative | 3033866 - 3034852 | 34913.6 |
| Trna-lys | Not Available | Not Available | Positive | 3035021 - 3035096 | Not Available |
| thioredoxin-dependent thiol peroxidase | D1781_15215 | Not Available | Positive | 3035154 - 3035633 | 17218.2 |
| hypothetical protein | D1781_15220 | Not Available | Negative | 3035641 - 3036000 | 12037.8 |
| whib family transcriptional regulator | D1781_15225 | Not Available | Positive | 3036294 - 3036542 | 9061.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
