Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate dehydrogenase | D1781_14975 | Not Available | Negative | 2984630 - 2986222 | 54952.1 |
| mannitol-1-phosphate 5-dehydrogenase | D1781_14980 | Not Available | Negative | 2986459 - 2987625 | 41757.3 |
| hypothetical protein | D1781_14985 | Not Available | Negative | 2987669 - 2988013 | 11770.1 |
| hypothetical protein | D1781_14990 | Not Available | Negative | 2988010 - 2988432 | 14547.8 |
| transcriptional regulator | D1781_15000 | Not Available | Positive | 2989708 - 2990010 | 11365.7 |
| ppox class f420-dependent oxidoreductase | D1781_15005 | Not Available | Negative | 2990020 - 2990415 | 14356.4 |
| hypothetical protein | D1781_15010 | Not Available | Positive | 2990491 - 2990853 | 12444.4 |
| hypothetical protein | D1781_15015 | Not Available | Negative | 2990843 - 2991904 | 36612.9 |
| nlpc/p60 family protein | D1781_15020 | Not Available | Negative | 2992263 - 2993393 | 37744.3 |
| ketol-acid reductoisomerase | D1781_15025 | Not Available | Negative | 2993678 - 2994703 | 37336.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
