Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_14925 | Not Available | Positive | 2974571 - 2975284 | 24066.1 |
| hypothetical protein | D1781_14930 | Not Available | Positive | 2975303 - 2976013 | 23487.4 |
| Trna-gln | Not Available | Not Available | Positive | 2976083 - 2976154 | Not Available |
| hypothetical protein | D1781_14940 | Not Available | Negative | 2976243 - 2977196 | 34706.4 |
| glutamate--trna ligase | D1781_14945 | Not Available | Negative | 2977193 - 2978695 | 55231.6 |
| faa hydrolase family protein | D1781_14950 | Not Available | Negative | 2978727 - 2979497 | 27344.9 |
| fpg/nei family dna glycosylase | D1781_14955 | Not Available | Positive | 2979640 - 2980494 | 30749.2 |
| branched-chain amino acid aminotransferase | D1781_14960 | Not Available | Negative | 2980627 - 2981730 | 40366.8 |
| 3-isopropylmalate dehydrogenase | D1781_14965 | Not Available | Negative | 2981727 - 2982788 | 36266.3 |
| apc family permease | D1781_14970 | Not Available | Negative | 2982887 - 2984482 | 56379.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
