Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | D1781_14565 | Not Available | Negative | 2915042 - 2916115 | 38520.8 |
| mfs transporter | D1781_14570 | Not Available | Negative | 2916177 - 2917412 | 40379.5 |
| lysr family transcriptional regulator | D1781_14575 | Not Available | Negative | 2917431 - 2918360 | 32994.6 |
| tetr/acrr family transcriptional regulator | D1781_14580 | Not Available | Positive | 2918613 - 2919260 | 23891.9 |
| sdr family nad(p)-dependent oxidoreductase | D1781_14585 | Not Available | Positive | 2919257 - 2920213 | 34110.0 |
| sdr family oxidoreductase | D1781_14590 | Not Available | Negative | 2920268 - 2921056 | 27220.4 |
| marr family transcriptional regulator | D1781_14595 | Not Available | Positive | 2921207 - 2921626 | 15632.7 |
| xre family transcriptional regulator | D1781_14600 | Not Available | Negative | 2921657 - 2922541 | 32280.6 |
| sdr family oxidoreductase | D1781_14605 | Not Available | Positive | 2922540 - 2923211 | 22463.0 |
| sdr family nad(p)-dependent oxidoreductase | D1781_14610 | Not Available | Positive | 2923208 - 2924014 | 27868.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
