Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_14310 | Not Available | Negative | 2868571 - 2869395 | 26975.3 |
| atp-binding cassette domain-containing protein | D1781_14315 | Not Available | Negative | 2869392 - 2870348 | 33825.8 |
| sigma-70 family rna polymerase sigma factor | D1781_14320 | Not Available | Positive | 2870601 - 2871107 | 18956.7 |
| hypothetical protein | D1781_14325 | Not Available | Positive | 2871118 - 2871918 | 27460.3 |
| gnat family n-acetyltransferase | D1781_14330 | Not Available | Negative | 2872064 - 2872843 | 27114.4 |
| glycosyltransferase | D1781_14335 | Not Available | Positive | 2873130 - 2874398 | 44435.7 |
| luxr family transcriptional regulator | D1781_14340 | Not Available | Negative | 2874414 - 2876390 | 70766.0 |
| hypothetical protein | D1781_14345 | Not Available | Positive | 2876540 - 2876788 | 8714.52 |
| glycosyltransferase | D1781_14350 | Not Available | Positive | 2876920 - 2878047 | 38758.8 |
| 1,4-dihydroxy-2-naphthoate polyprenyltransferase | D1781_14355 | Not Available | Positive | 2878061 - 2878930 | 28942.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
