Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | D1781_14155 | Not Available | Positive | 2838419 - 2839336 | 33568.8 |
| duf2029 domain-containing protein | D1781_14160 | Not Available | Positive | 2839403 - 2840935 | 51629.9 |
| voc family protein | D1781_14165 | Not Available | Negative | 2840951 - 2841367 | 14976.7 |
| hypothetical protein | D1781_14170 | Not Available | Positive | 2841549 - 2842001 | 16140.0 |
| n-acetyltransferase | D1781_14175 | Not Available | Negative | 2842042 - 2842461 | 15132.2 |
| hypothetical protein | D1781_14180 | Not Available | Negative | 2842513 - 2842935 | 13912.8 |
| hypothetical protein | D1781_14185 | Not Available | Positive | 2843353 - 2843814 | 15896.9 |
| tetr/acrr family transcriptional regulator | D1781_14195 | Not Available | Negative | 2844140 - 2844724 | 20869.0 |
| xre family transcriptional regulator | D1781_14200 | Not Available | Positive | 2844615 - 2845721 | 40475.0 |
| methylmalonate-semialdehyde dehydrogenase (coa acylating) | D1781_14205 | Not Available | Negative | 2845749 - 2847290 | 54730.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
