Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | D1781_14105 | Not Available | Positive | 2829701 - 2830621 | 32890.6 |
| sdr family oxidoreductase | D1781_14110 | Not Available | Positive | 2830618 - 2831361 | 25506.6 |
| hypothetical protein | D1781_14115 | Not Available | Negative | 2831393 - 2831632 | 8654.14 |
| n-acetyltransferase | D1781_14120 | Not Available | Negative | 2831675 - 2832235 | 19317.1 |
| peptidase e | D1781_14125 | Not Available | Negative | 2832292 - 2832993 | 24736.6 |
| dna topoisomerase ib | D1781_14130 | Not Available | Positive | 2833065 - 2834120 | 36669.3 |
| exo-alpha-sialidase | D1781_14135 | Not Available | Negative | 2834218 - 2835249 | 37526.8 |
| hypothetical protein | D1781_14140 | Not Available | Negative | 2835647 - 2835829 | 6583.61 |
| nadp-dependent oxidoreductase | D1781_14145 | Not Available | Negative | 2835962 - 2836894 | 31784.4 |
| mfs transporter | D1781_14150 | Not Available | Positive | 2837035 - 2838447 | 48093.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
