Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fuconate dehydratase | D1781_13805 | Not Available | Negative | 2773919 - 2775220 | 47512.3 |
| aldo/keto reductase | D1781_13810 | Not Available | Negative | 2775222 - 2776211 | 34864.1 |
| zn-dependent alcohol dehydrogenase | D1781_13815 | Not Available | Positive | 2776338 - 2777366 | 35999.3 |
| sdr family oxidoreductase | D1781_13820 | Not Available | Positive | 2777363 - 2778121 | 25929.9 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | D1781_13825 | Not Available | Positive | 2778118 - 2778750 | 20384.8 |
| sugar kinase | D1781_13830 | Not Available | Positive | 2778747 - 2779676 | 31928.0 |
| l-rhamnose mutarotase | D1781_13835 | Not Available | Negative | 2779714 - 2780028 | 12092.0 |
| mandelate racemase/muconate lactonizing enzyme family protein | D1781_13840 | Not Available | Negative | 2780064 - 2781245 | 42055.8 |
| carbohydrate abc transporter permease | D1781_13845 | Not Available | Negative | 2781274 - 2782209 | 33047.6 |
| sugar abc transporter permease | D1781_13850 | Not Available | Negative | 2782206 - 2783144 | 33196.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
