Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_13655 | Not Available | Positive | 2743461 - 2744408 | 31306.2 |
| hypothetical protein | D1781_13660 | Not Available | Positive | 2744401 - 2744649 | 8397.15 |
| hypothetical protein | D1781_13665 | Not Available | Positive | 2744646 - 2745965 | 43845.4 |
| hypothetical protein | D1781_13670 | Not Available | Positive | 2745962 - 2746786 | 27348.9 |
| type vii secretion protein eccca | D1781_13675 | Not Available | Positive | 2746783 - 2750706 | 139299.0 |
| hypothetical protein | D1781_13680 | Not Available | Positive | 2750703 - 2751323 | 21670.1 |
| tigr03767 family metallophosphoesterase | D1781_13685 | Not Available | Negative | 2751498 - 2753246 | 62747.7 |
| arginase family protein | D1781_13690 | Not Available | Positive | 2753415 - 2754464 | 36646.2 |
| hypothetical protein | D1781_13695 | Not Available | Negative | 2754445 - 2754915 | 17230.7 |
| terc family protein | D1781_13700 | Not Available | Negative | 2754954 - 2756012 | 38820.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
