Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | D1781_13605 | Not Available | Negative | 2733848 - 2735215 | 48880.1 |
| 3-isopropylmalate dehydratase small subunit | D1781_13610 | Not Available | Negative | 2735251 - 2735853 | 21868.8 |
| 3-isopropylmalate dehydratase large subunit | D1781_13615 | Not Available | Negative | 2735853 - 2737259 | 50098.6 |
| hypothetical protein | D1781_13620 | Not Available | Positive | 2737684 - 2738697 | 34998.2 |
| hypothetical protein | D1781_13625 | Not Available | Positive | 2738699 - 2739019 | 10957.2 |
| hypothetical protein | D1781_13630 | Not Available | Negative | 2739220 - 2739951 | 26129.8 |
| hypothetical protein | D1781_13635 | Not Available | Negative | 2739977 - 2742154 | 76355.5 |
| hypothetical protein | D1781_13640 | Not Available | Negative | 2742151 - 2742513 | 11934.3 |
| hypothetical protein | D1781_13645 | Not Available | Negative | 2742521 - 2742820 | 10713.2 |
| hypothetical protein | D1781_13650 | Not Available | Negative | 2742856 - 2743188 | 11478.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
