Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | D1781_13505 | Not Available | Negative | 2716084 - 2717211 | 39420.6 |
| amidohydrolase | D1781_13510 | Not Available | Negative | 2717423 - 2719084 | 57658.1 |
| hypothetical protein | D1781_13515 | Not Available | Positive | 2719162 - 2719356 | 6836.76 |
| hypothetical protein | D1781_13520 | Not Available | Positive | 2719555 - 2719842 | 9868.54 |
| 2-phospho-l-lactate guanylyltransferase | D1781_13525 | Not Available | Negative | 2719992 - 2720708 | 25195.2 |
| coenzyme f420-0:l-glutamate ligase | D1781_13530 | Not Available | Negative | 2720702 - 2721517 | 27788.8 |
| tigr03557 family f420-dependent llm class oxidoreductase | D1781_13535 | Not Available | Negative | 2721514 - 2722482 | 35848.7 |
| lrp/asnc family transcriptional regulator | D1781_13540 | Not Available | Negative | 2722575 - 2723036 | 16741.2 |
| duf2000 domain-containing protein | D1781_13545 | Not Available | Positive | 2723118 - 2723600 | 16668.9 |
| gnat family n-acetyltransferase | D1781_13550 | Not Available | Negative | 2723684 - 2724139 | 16236.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
