Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | D1781_13405 | Not Available | Positive | 2700526 - 2701359 | 29477.2 |
| hypothetical protein | D1781_13410 | Not Available | Negative | 2701375 - 2701695 | 11287.0 |
| marr family transcriptional regulator | D1781_13415 | Not Available | Negative | 2701778 - 2702260 | 17146.5 |
| pyridoxamine 5'-phosphate oxidase | D1781_13420 | Not Available | Positive | 2702346 - 2702843 | 18173.2 |
| nad-dependent epimerase/dehydratase family protein | D1781_13425 | Not Available | Positive | 2702875 - 2703594 | 26080.4 |
| aldo/keto reductase | D1781_13430 | Not Available | Negative | 2703698 - 2704723 | 37823.9 |
| tetr/acrr family transcriptional regulator | D1781_13435 | Not Available | Positive | 2704860 - 2705471 | 21675.8 |
| atp-binding protein | D1781_13440 | Not Available | Negative | 2705714 - 2706235 | 19255.2 |
| n-acetyltransferase | D1781_13445 | Not Available | Negative | 2706232 - 2706783 | 20265.9 |
| hypothetical protein | D1781_13450 | Not Available | Negative | 2706780 - 2707388 | 21343.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
