Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | D1781_13355 | Not Available | Positive | 2690860 - 2691606 | 26105.5 |
| class c beta-lactamase-related serine hydrolase | D1781_13360 | Not Available | Negative | 2691622 - 2692497 | 31919.9 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | D1781_13365 | Not Available | Negative | 2692551 - 2693573 | 35347.4 |
| four-carbon acid sugar kinase family protein | D1781_13370 | Not Available | Negative | 2693574 - 2694674 | 37368.4 |
| aldo/keto reductase | D1781_13375 | Not Available | Negative | 2694709 - 2695548 | 30711.1 |
| bcr/cfla family efflux mfs transporter | D1781_13380 | Not Available | Negative | 2695603 - 2696871 | 42703.0 |
| methionine synthase | D1781_13385 | Not Available | Negative | 2696914 - 2697951 | 38355.4 |
| duf1852 domain-containing protein | D1781_13390 | Not Available | Negative | 2697972 - 2698964 | 37558.8 |
| lysr family transcriptional regulator | D1781_13395 | Not Available | Positive | 2699088 - 2700029 | 35030.0 |
| hypothetical protein | D1781_13400 | Not Available | Negative | 2700053 - 2700427 | 12366.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
