Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_13305 | Not Available | Negative | 2679309 - 2679551 | 8526.43 |
| ghkl domain-containing protein | D1781_13310 | Not Available | Positive | 2680173 - 2682272 | 77568.1 |
| mbl fold metallo-hydrolase | D1781_13315 | Not Available | Positive | 2682915 - 2683994 | 37420.3 |
| xre family transcriptional regulator | D1781_13320 | Not Available | Positive | 2684229 - 2685098 | 32090.2 |
| aldo/keto reductase | D1781_13325 | Not Available | Positive | 2685171 - 2686049 | 32478.2 |
| vanz family protein | D1781_13330 | Not Available | Negative | 2686155 - 2687219 | 37305.8 |
| nad(p)/fad-dependent oxidoreductase | D1781_13335 | Not Available | Positive | 2687350 - 2688672 | 47643.7 |
| rna polymerase sigma factor sigj | D1781_13340 | Not Available | Positive | 2688702 - 2689631 | 33674.5 |
| nmra family protein | D1781_13345 | Not Available | Positive | 2689704 - 2690453 | 26085.0 |
| hypothetical protein | D1781_13350 | Not Available | Positive | 2690450 - 2690863 | 14330.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
