Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphate-requiring protein | D1781_13200 | Not Available | Negative | 2656450 - 2658276 | 65956.2 |
| duf1206 domain-containing protein | D1781_13205 | Not Available | Negative | 2658362 - 2659474 | 38196.3 |
| apc family permease | D1781_13210 | Not Available | Positive | 2659368 - 2660684 | 45338.9 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | D1781_13215 | Not Available | Negative | 2660648 - 2661598 | 34330.3 |
| ribonuclease iii | D1781_13220 | Not Available | Negative | 2661591 - 2662223 | 22103.0 |
| 50s ribosomal protein l32 | D1781_13225 | Not Available | Negative | 2662282 - 2662485 | 7596.18 |
| duf177 domain-containing protein | D1781_13230 | Not Available | Negative | 2662488 - 2662958 | 16849.7 |
| aspartate aminotransferase family protein | D1781_13235 | Not Available | Negative | 2663083 - 2664399 | 46784.9 |
| glycosyltransferase family 2 protein | D1781_13245 | Not Available | Negative | 2665922 - 2667415 | 53985.4 |
| 2-phospho-l-lactate transferase | D1781_13250 | Not Available | Positive | 2667461 - 2668429 | 33582.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
