Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma carbonic anhydrase family protein | D1781_13150 | Not Available | Positive | 2644577 - 2645089 | 17544.2 |
| signal recognition particle-docking protein ftsy | D1781_13155 | Not Available | Negative | 2645197 - 2646069 | 30930.1 |
| nad(p)-dependent oxidoreductase | D1781_13160 | Not Available | Positive | 2646150 - 2647031 | 30205.7 |
| shikimate 5-dehydrogenase | D1781_13165 | Not Available | Positive | 2647035 - 2647838 | 27953.3 |
| chromosome segregation protein smc | D1781_13170 | Not Available | Negative | 2648081 - 2651467 | 118301.0 |
| acyl-coa dehydrogenase | D1781_13175 | Not Available | Negative | 2651555 - 2652511 | 32013.4 |
| hypothetical protein | D1781_13180 | Not Available | Negative | 2652719 - 2653276 | 18975.0 |
| response regulator | D1781_13185 | Not Available | Positive | 2653454 - 2654113 | 23382.1 |
| sensor histidine kinase | D1781_13190 | Not Available | Positive | 2654113 - 2655492 | 48321.0 |
| duf1345 domain-containing protein | D1781_13195 | Not Available | Negative | 2655757 - 2656443 | 24810.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
