Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle protein | D1781_13100 | Not Available | Negative | 2634411 - 2635979 | 55607.9 |
| serine/threonine protein kinase | D1781_13105 | Not Available | Positive | 2636042 - 2637163 | 39185.0 |
| vwa domain-containing protein | D1781_13110 | Not Available | Negative | 2637170 - 2639113 | 65921.6 |
| xre family transcriptional regulator | D1781_13115 | Not Available | Positive | 2639201 - 2639716 | 17940.4 |
| nad-dependent epimerase/dehydratase family protein | D1781_13120 | Not Available | Negative | 2639713 - 2640702 | 34741.8 |
| pyrophosphatase | D1781_13125 | Not Available | Negative | 2640749 - 2641090 | 12782.1 |
| aldo/keto reductase | D1781_13130 | Not Available | Positive | 2641195 - 2642103 | 31356.4 |
| hd domain-containing protein | D1781_13135 | Not Available | Negative | 2642158 - 2642760 | 21952.1 |
| lipoyl(octanoyl) transferase lipb | D1781_13140 | Not Available | Positive | 2642810 - 2643475 | 23831.5 |
| lipoyl synthase | D1781_13145 | Not Available | Positive | 2643562 - 2644524 | 35536.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
