Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase family protein | D1781_13050 | Not Available | Negative | 2624347 - 2625321 | 33694.1 |
| alpha/beta fold hydrolase | D1781_13055 | Not Available | Negative | 2625318 - 2627882 | 88911.5 |
| 3-oxoacyl-acp synthase iii | D1781_13060 | Not Available | Negative | 2627879 - 2629042 | 41319.4 |
| glutamate--cysteine ligase | D1781_13065 | Not Available | Positive | 2629041 - 2630180 | 42151.0 |
| llm class f420-dependent oxidoreductase | D1781_13070 | Not Available | Negative | 2630238 - 2631038 | 29577.8 |
| ester cyclase | D1781_13075 | Not Available | Positive | 2631264 - 2631686 | 15129.7 |
| ybhb/ybcl family raf kinase inhibitor-like protein | D1781_13080 | Not Available | Negative | 2631760 - 2632287 | 18181.1 |
| duf1731 domain-containing protein | D1781_13085 | Not Available | Negative | 2632343 - 2633299 | 34502.5 |
| duf4166 domain-containing protein | D1781_13090 | Not Available | Negative | 2633296 - 2633907 | 22101.9 |
| ppox class f420-dependent oxidoreductase | D1781_13095 | Not Available | Negative | 2633911 - 2634303 | 14434.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
