Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2469 family protein | D1781_13000 | Not Available | Negative | 2617984 - 2618307 | 13252.3 |
| ribonuclease hii | D1781_13005 | Not Available | Negative | 2618320 - 2618988 | 23105.6 |
| signal peptidase i | D1781_13010 | Not Available | Negative | 2619009 - 2619749 | 26540.8 |
| 50s ribosomal protein l19 | D1781_13015 | Not Available | Negative | 2619832 - 2620182 | 13126.9 |
| voc family protein | D1781_13020 | Not Available | Negative | 2620354 - 2621190 | 30834.6 |
| type i methionyl aminopeptidase | D1781_13025 | Not Available | Positive | 2621349 - 2622116 | 27260.3 |
| trna (guanosine(37)-n1)-methyltransferase trmd | D1781_13030 | Not Available | Negative | 2622161 - 2622850 | 24945.7 |
| ribosome maturation factor rimm | D1781_13035 | Not Available | Negative | 2622852 - 2623466 | 22284.1 |
| rna-binding protein | D1781_13040 | Not Available | Negative | 2623466 - 2623702 | 8395.17 |
| 30s ribosomal protein s16 | D1781_13045 | Not Available | Negative | 2623702 - 2624172 | 17076.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
