Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ump kinase | D1781_12945 | Not Available | Negative | 2607399 - 2608097 | 24340.3 |
| elongation factor ts | D1781_12955 | Not Available | Negative | 2609409 - 2610236 | 28867.2 |
| 30s ribosomal protein s2 | D1781_12960 | Not Available | Negative | 2610330 - 2611442 | 40476.3 |
| m23 family peptidase | D1781_12965 | Not Available | Positive | 2611877 - 2612356 | 16187.5 |
| recombinase xerc | D1781_12970 | Not Available | Negative | 2612358 - 2613272 | 32442.7 |
| phosphodiesterase | D1781_12975 | Not Available | Negative | 2613355 - 2614209 | 29474.7 |
| dna-protecting protein dpra | D1781_12980 | Not Available | Negative | 2614219 - 2615400 | 40455.4 |
| atp-binding protein | D1781_12985 | Not Available | Negative | 2615397 - 2616926 | 53471.3 |
| yran family protein | D1781_12990 | Not Available | Negative | 2616956 - 2617315 | 13052.8 |
| nitroreductase family deazaflavin-dependent oxidoreductase | D1781_12995 | Not Available | Negative | 2617416 - 2617829 | 15371.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
