Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar transferase | D1781_12890 | Not Available | Positive | 2595964 - 2597427 | 52854.2 |
| co-chaperone ybbn | D1781_12895 | Not Available | Negative | 2597608 - 2598573 | 33319.3 |
| hypothetical protein | D1781_12900 | Not Available | Negative | 2598579 - 2600312 | 59887.7 |
| hypothetical protein | D1781_12905 | Not Available | Positive | 2600585 - 2601976 | 51580.6 |
| ai-2e family transporter | D1781_12910 | Not Available | Positive | 2601993 - 2603060 | 37156.2 |
| alpha/beta hydrolase | D1781_12915 | Not Available | Negative | 2603424 - 2604188 | 27059.3 |
| hypothetical protein | D1781_12920 | Not Available | Negative | 2604158 - 2604433 | 10287.2 |
| diviva domain-containing protein | D1781_12930 | Not Available | Negative | 2605172 - 2605714 | 20173.8 |
| phosphatidate cytidylyltransferase | D1781_12935 | Not Available | Negative | 2605779 - 2606798 | 35361.9 |
| ribosome recycling factor | D1781_12940 | Not Available | Negative | 2606802 - 2607356 | 20513.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
