Amnibacterium setariae strain DD4a

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Amnibacterium

Description

Amnibacterium setariae strain DD4a is a Gram-positive, rod-shaped bacterium characterized by a single replicon. This organism is cataloged under the accession number QXTG00000000.1, which provides a reference for its genomic information and classification. The Gram-positive nature of A. setariae indicates that it possesses a thick peptidoglycan layer in its cell wall, a feature commonly associated with increased resistance to environmental stressors. The rod shape is typical of many bacterial species and may influence its motility and ecological interactions. The presence of a single replicon suggests a streamlined genomic structure, which can be associated with efficient replication processes and potentially a focused metabolic capability. This trait may facilitate adaptation to specific ecological niches, particularly in environments where resources are limited. In summary, Amnibacterium setariae strain DD4a exhibits significant traits such as being Gram-positive, rod-shaped, and possessing a single replicon. These characteristics may play a crucial role in its ecological interactions and adaptability, making it an interesting subject for further microbiological and ecological studies.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusAmnibacterium
SpeciesAmnibacterium setariae
Strainstrain DD4a

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amnibacterium setariae strain DD4a contig5, whole genome shotgun

Gene Summary

Adenine Count

456377 bp

Thymine Count

452969 bp

Guanine Count

1283414 bp

Cytosine Count

1289945 bp

Genome Length

3482706 bp

Protein-coding Genes

3370 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatcD1781_12835Not AvailableNegative2577843 - 257815410814.9
g-d-s-l family lipolytic proteinD1781_12840Not AvailableNegative2578252 - 257885420755.9
gnat family n-acetyltransferaseD1781_12845Not AvailableNegative2578851 - 257927614946.0
nad-dependent dna ligase ligaD1781_12850Not AvailableNegative2579348 - 258166383034.4
trna 2-thiouridine(34) synthase mnmaD1781_12855Not AvailableNegative2581721 - 258281838459.7
hypothetical proteinD1781_12860Not AvailableNegative2582907 - 258481464891.1
cysteine desulfuraseD1781_12865Not AvailableNegative2584951 - 258609037076.4
glycosyltransferase family 1 proteinD1781_12875Not AvailableNegative2588536 - 259112193521.8
alpha-1,4-glucan--maltose-1-phosphate maltosyltransferaseD1781_12880Not AvailablePositive2591182 - 259335680265.3
1,4-alpha-glucan branching protein glgbD1781_12885Not AvailablePositive2593408 - 259564283274.5

Displaying genes 2541 – 2550 of 3420 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.