Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family hydrolase | D1781_12735 | Not Available | Negative | 2558569 - 2559240 | 23855.0 |
| metallophosphoesterase | D1781_12740 | Not Available | Positive | 2559271 - 2559765 | 17804.2 |
| hypothetical protein | D1781_12745 | Not Available | Negative | 2559708 - 2560709 | 36784.9 |
| duf3097 domain-containing protein | D1781_12750 | Not Available | Negative | 2560808 - 2561719 | 33525.4 |
| nad(p)-dependent oxidoreductase | D1781_12755 | Not Available | Positive | 2561788 - 2562588 | 27874.7 |
| nucleoside deaminase | D1781_12760 | Not Available | Negative | 2562705 - 2563169 | 16762.5 |
| cytosine permease | D1781_12765 | Not Available | Negative | 2563166 - 2564647 | 50879.4 |
| sdr family nad(p)-dependent oxidoreductase | D1781_12770 | Not Available | Negative | 2564732 - 2565556 | 29677.0 |
| nad(p)/fad-dependent oxidoreductase | D1781_12775 | Not Available | Negative | 2565629 - 2567092 | 50457.6 |
| n-acetyltransferase | D1781_12780 | Not Available | Positive | 2567149 - 2567433 | 10649.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
