Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iv | D1781_12685 | Not Available | Negative | 2550241 - 2551407 | 42426.8 |
| gnat family n-acetyltransferase | D1781_12690 | Not Available | Negative | 2551661 - 2552161 | 18666.5 |
| hypothetical protein | D1781_12695 | Not Available | Negative | 2552158 - 2552718 | 20304.4 |
| type iii polyketide synthase | D1781_12700 | Not Available | Negative | 2552727 - 2553818 | 38064.6 |
| magnesium and cobalt transport protein cora | D1781_12705 | Not Available | Positive | 2553894 - 2554910 | 38160.5 |
| osmc family peroxiredoxin | D1781_12710 | Not Available | Negative | 2554962 - 2555405 | 14843.2 |
| duf2236 domain-containing protein | D1781_12715 | Not Available | Negative | 2555455 - 2556312 | 31567.6 |
| hypothetical protein | D1781_12720 | Not Available | Negative | 2556397 - 2557050 | 22210.6 |
| tigr03557 family f420-dependent llm class oxidoreductase | D1781_12725 | Not Available | Positive | 2557227 - 2558207 | 35591.9 |
| duf3072 domain-containing protein | D1781_12730 | Not Available | Negative | 2558272 - 2558508 | 8299.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
