Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | D1781_12635 | Not Available | Negative | 2535715 - 2537241 | 52520.1 |
| hypothetical protein | D1781_12640 | Not Available | Negative | 2537260 - 2537577 | 10605.8 |
| glycogen debranching enzyme glgx | D1781_12645 | Not Available | Positive | 2537674 - 2539896 | 82698.0 |
| malto-oligosyltrehalose synthase | D1781_12650 | Not Available | Positive | 2539904 - 2542282 | 86408.8 |
| malto-oligosyltrehalose trehalohydrolase | D1781_12655 | Not Available | Positive | 2542279 - 2544027 | 64257.1 |
| mfs transporter | D1781_12660 | Not Available | Negative | 2544097 - 2545431 | 42636.7 |
| nad(p)/fad-dependent oxidoreductase | D1781_12665 | Not Available | Positive | 2545558 - 2546736 | 41767.8 |
| class f sortase | D1781_12670 | Not Available | Negative | 2546741 - 2547361 | 22075.5 |
| duf4397 domain-containing protein | D1781_12675 | Not Available | Negative | 2547409 - 2548242 | 27645.7 |
| hypothetical protein | D1781_12680 | Not Available | Negative | 2548304 - 2550235 | 64294.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
