Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amnibacterium setariae strain DD4a
Accession NumberQXTG00000000.1
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-ketoacid dehydrogenase subunit beta | D1781_01205 | Not Available | + | 236855 - 237820 | 34473.6 |
| 2-oxo acid dehydrogenase subunit e2 | D1781_01210 | Not Available | + | 237828 - 239129 | 45735.8 |
| abc transporter substrate-binding protein | D1781_01215 | Not Available | + | 239185 - 240087 | 31926.5 |
| metal abc transporter atp-binding protein | D1781_01220 | Not Available | + | 240084 - 240878 | 28486.3 |
| metal abc transporter permease | D1781_01225 | Not Available | + | 240875 - 241714 | 28231.8 |
| transcriptional repressor | D1781_01230 | Not Available | + | 241711 - 242094 | 13788.0 |
| 50s ribosomal protein l28 | D1781_01235 | Not Available | + | 242367 - 242603 | 8528.45 |
| 50s ribosomal protein l33 | D1781_01240 | Not Available | + | 242603 - 242770 | 6615.03 |
| 30s ribosomal protein s14 | D1781_01245 | Not Available | + | 242773 - 243078 | 11639.1 |
| integration host factor | D1781_01250 | Not Available | + | 243185 - 243469 | 9737.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.