Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_12535 | Not Available | Negative | 2518999 - 2520876 | 65389.6 |
| serine/threonine protein kinase | D1781_12540 | Not Available | Negative | 2521045 - 2522490 | 48251.0 |
| hypothetical protein | D1781_12545 | Not Available | Negative | 2522561 - 2522818 | 8785.95 |
| atp-dependent dna ligase | D1781_12550 | Not Available | Negative | 2522995 - 2523312 | 12144.3 |
| hypothetical protein | D1781_12555 | Not Available | Positive | 2523613 - 2524254 | 21629.9 |
| signal peptidase i | D1781_12560 | Not Available | Positive | 2524238 - 2524822 | 20092.7 |
| hypothetical protein | D1781_12565 | Not Available | Positive | 2524819 - 2526507 | 53542.3 |
| spore photoproduct lyase family protein | D1781_12570 | Not Available | Negative | 2526518 - 2527612 | 40651.6 |
| aldo/keto reductase family oxidoreductase | D1781_12575 | Not Available | Positive | 2527759 - 2528685 | 34094.3 |
| duf2090 domain-containing protein | D1781_12580 | Not Available | Negative | 2528909 - 2529904 | 36476.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
