Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_12380 | Not Available | Negative | 2492755 - 2493987 | 44515.1 |
| Trna-gly | Not Available | Not Available | Positive | 2494091 - 2494164 | Not Available |
| hypothetical protein | D1781_12390 | Not Available | Negative | 2494250 - 2494870 | 22623.7 |
| amidohydrolase | D1781_12400 | Not Available | Negative | 2495400 - 2496770 | 47695.9 |
| fpg/nei family dna glycosylase | D1781_12405 | Not Available | Negative | 2496839 - 2497930 | 39889.5 |
| ribose-5-phosphate isomerase | D1781_12410 | Not Available | Negative | 2497932 - 2498429 | 17804.8 |
| aminopeptidase n | D1781_12415 | Not Available | Positive | 2498638 - 2501244 | 95006.0 |
| mechanosensitive ion channel protein mscs | D1781_12420 | Not Available | Positive | 2501231 - 2502406 | 41695.0 |
| globin | D1781_12425 | Not Available | Positive | 2502399 - 2502788 | 14981.7 |
| hypothetical protein | D1781_12430 | Not Available | Negative | 2502800 - 2503213 | 14014.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
