Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide adenylyltransferase | D1781_12125 | Not Available | Negative | 2446510 - 2447073 | 20636.4 |
| hypothetical protein | D1781_12130 | Not Available | Negative | 2447139 - 2447330 | 6439.79 |
| glutamate-5-semialdehyde dehydrogenase | D1781_12135 | Not Available | Negative | 2447398 - 2448672 | 44288.5 |
| glutamate 5-kinase | D1781_12140 | Not Available | Negative | 2448726 - 2449526 | 27621.1 |
| gtpase obge | D1781_12145 | Not Available | Negative | 2449523 - 2451034 | 53204.9 |
| 50s ribosomal protein l27 | D1781_12150 | Not Available | Negative | 2451117 - 2451398 | 9623.47 |
| 50s ribosomal protein l21 | D1781_12155 | Not Available | Negative | 2451409 - 2451717 | 11229.7 |
| duf4031 domain-containing protein | D1781_12160 | Not Available | Positive | 2451921 - 2452184 | 9774.66 |
| rne/rng family ribonuclease | D1781_12165 | Not Available | Negative | 2452333 - 2454855 | 91429.8 |
| hypothetical protein | D1781_12170 | Not Available | Positive | 2455152 - 2455745 | 21326.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
