Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease subunit | D1781_12075 | Not Available | Negative | 2436249 - 2436950 | 24189.2 |
| atp-binding cassette domain-containing protein | D1781_12080 | Not Available | Negative | 2436950 - 2437867 | 32463.0 |
| duf2183 domain-containing protein | D1781_12085 | Not Available | Positive | 2438073 - 2439065 | 36321.2 |
| glucose-6-phosphate dehydrogenase | D1781_12090 | Not Available | Negative | 2439088 - 2440479 | 49887.7 |
| acyl-coa dehydrogenase | D1781_12095 | Not Available | Positive | 2440586 - 2441743 | 40494.8 |
| dha2 family efflux mfs transporter permease subunit | D1781_12100 | Not Available | Positive | 2441811 - 2443250 | 48756.1 |
| Trna-ala | Not Available | Not Available | Positive | 2443321 - 2443396 | Not Available |
| helix-turn-helix domain-containing protein | D1781_12110 | Not Available | Positive | 2443569 - 2444552 | 35843.1 |
| ribosome silencing factor | D1781_12115 | Not Available | Negative | 2444556 - 2444921 | 13267.5 |
| hypothetical protein | D1781_12120 | Not Available | Negative | 2444930 - 2446513 | 56060.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
